BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A06SP1|AL428826
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig706 1637 0.0
>3x_Contig706
Length = 2070
Score = 1637 bits (820), Expect = 0.0
Identities = 847/862 (98%)
Strand = Plus / Plus
Query: 1 gatcaagaattgtacgtgaactttcaatataaccaggatcgtactttctttcataccttt 60
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 364 gatcaagaattgtacgtgaacggtcaatataaccaggatcgtactttctttcataccttt 423
Query: 61 gaattagaacaatgtaacgccgggttgttattcaccgatattggcgatgcttcacatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaattagaacaatgtaacgccgggttgttattcaccgatattggcgatgcttcacatttt 483
Query: 121 ttgaaacgagtacagaaacgggagatatacgcgtccaagaagaccttggccaacaagaat 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 484 ttgaaacgagtacagaaacgggagaaatacgcgtccaagaagaccttggccaacaagaat 543
Query: 181 gcwattgcattagaggaccaaattaagawagaggaagagagttaagtgatccatggtcca 240
|| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 544 gcaattgcattagaggaccaaattaagaaagaggaagagagtaaagtgatccatggtcca 603
Query: 241 agaggcgaatccttgatcagtgaccaaagggtcagatatagatatgaaccggaaaagcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agaggcgaatccttgatcagtgaccaaagggtcagatatagatatgaaccggaaaagcac 663
Query: 301 gagcaccgccaggwacaccattacgagcagcccagccagaattatgcttcaactgawaac 360
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 664 gagcaccgccaggaacaccattacgagcagcccagccagaattatgcttcaactgaaaac 723
Query: 361 tcagcttcagatgcwagtkccgctcctccttcttttgcctcgaaaccaccgccaccgcct 420
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcagcttcagatgcaagtgccgctcctccttcttttgcctcgaaaccaccgccaccgcct 783
Query: 421 gtygagaaacaacctcctcctcctgtgagcttcccatcttataagttcgactctwttcca 480
|| ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 784 gtcgagaaacaacctcctcctcctgtgagcatcccatcttataagtacgactctattcca 843
Query: 481 tcattcccaagctctcctgcacctccatcggtttcctctactcattctcctaccccggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tcattcccaagctctcctgcacctccatcggtttcctctactcattctcctaccccggat 903
Query: 541 tcatcctatgcatcaacaccagcaccaagtwatcctcctccaccaataaaccacccggta 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 904 tcatcctatgcatcaacaccagcaccaagtaatcctcctccaccaataaaccacccggta 963
Query: 601 catgcagttcctcctcctttaccagcagaacaatatcgtccactggctcagtcacctcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 catgcagttcctcctcctttaccagcagaacaatatcgtccactggctcagtcacctcat 1023
Query: 661 ccgcaattccagcagcagcataattctccttcacctgcagcacctccttcgattccgcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 ccgcaattccagcagcagcataattctccttcacctgcagcacctccttcgattccgcct 1083
Query: 721 atgcagcaaagcgttgcaatccctcctccaccttcccatccagctcaacaacaaaacgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 atgcagcaaagcgttgcaatccctcctccaccttcccatccagctcaacaacaaaacgtc 1143
Query: 781 actaataacaacactcctcagtttggacaatattctgttgctggtctgcaaccacctccg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 actaataacaacactcctcagtttggacaatattctgttgctggtctgcaaccacctccg 1203
Query: 841 agaccaacttcaacgagacctg 862
||||||||||||||||||||||
Sbjct: 1204 agaccaacttcaacgagacctg 1225
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4889
Number of Sequences: 1807
Number of extensions: 4889
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)